ngsqc.fastqc package¶

Submodules¶

ngsqc.fastqc.FastQC module¶

This is the beginning of Fastq

class ngsqc.fastqc.FastQC.FastQC(fqs, prefix)[source]¶

init the FastQC class

Parameters:	fq (str) – this is the input fastq file prefix (str) – the output prefix

byfastp()[source]¶: the docstring is cool

byfastqc()[source]¶

ngsqc.fastqc.fast_qc module¶

ngsqc.fastqc.fast_qc.qc(fqs, prefix)[source]¶

ngsqc.fastqc.fastp module¶

ngsqc.fastqc.fastp.qc(fqs, prefix)[source]¶: information for qc

ngsqc.fastqc.fastp2table module¶

ngsqc.fastqc.fastp2table.fastp2table(jsons, prex)[source]¶

Module contents¶